ncRNA ID | osa-miR5514 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:22840161-22840264 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UCCCAGAGCUUUGGCCGUCGC - 31 |
Stem-loop(if miRNA) |
-   GA   ---CU         UUU    -      -C      UCUGCCA  A  UUG  CAG     UCCCAGAGC   GGCC GUCGCU  CGGUCU       UG C  |||  |||     |||||||||   |||| ||||||  ||||||       ||  GAC  GUU     AGGGUCUUG   CCGG CAGCGG  GCCAGG       AC A A   AA   CAAGU         -UU    U      CC      -UUUCUA  U |
Stem-loop sequence | UUGGACAGCUUCCCAGAGCUUUGGCCGUCGCUCCGGUCUUCUGCCAUGACAUCAAUCUUUGGACCGCCGGCGACUGGCCUUGUUCUGGGAUGAACUUGAACAGA |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |