| ncRNA ID | osa-miR169f.2 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr2:18558299-18558512 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 184 - UGAGGACAAGAGCUGAUUCGG - 204 |
| Stem-loop(if miRNA) |
G - A - U U U CU U U UUAUACGCUGCUCAUCUGCAUUUUGAUUAUCCCCUGA GGCCUUCCAUGAG GACAAGAGCUG UUCGG UAGCCAAGGA GAC UGCC AAUGC AUG GCA GUGU U ||||||||||||| ||||||||||| ||||| |||||||||| ||| |||| ||||| ||| ||| |||| C UCGGAAGGUGCUC CUGUUCUCGGC AGGCU AUCGGUUCCU CUG ACGG AUAUA UAC AUA CUCA A G U G U U U - -- - - UGUCUCAUGAUGUGUGUGUAUAUUAACUGCUGUCCUG |
| Stem-loop sequence | GGGCCUUCCAUGAGGACAAGAGCUGAUUCGGUAGCCAAGGAUGACUUGCCUAAUGCCUAUGUGCAUGUGUUUAUACGCUGCUCAUCUGCAUUUUGAUUAUCCCCUGAUCAGUCCUGUCGUCAAUUAUAUGUGUGUGUAGUACUCUGUACUCAUACAUAUAUAGGCAUGUCUUCCUUGGCUAUUCGGAGCGGCUCUUGUCUCUCGUGGAAGGCUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK111459.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-183-C10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015779435.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized protein YnbB (LOC9267409), mRNA | uncharacterized protein YnbB(LOC9267409) | coding protein | psRNATarget | |||||||||
| XM_015761255.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group somatic embryogenesis receptor kinase 1 (LOC4350586), mRNA | somatic embryogenesis receptor kinase 1(LOC4350586) | coding protein | psRNATarget |
| 1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
| 2 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |