| ncRNA ID | osa-miR437 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr2:17050336-17050548 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 39 - AAAGUUAGAGAAGUUUGACUU - 59 |
| Stem-loop(if miRNA) |
UG UU U G A U U AAUUAACAUCUAAAAU AU -CA A CCCUCUGUUUCAUAU UA GUGUUU AGUUUUGUU UAAGUCAAA UUCUUU ACUUUGACCAAGUUUGUAG AAAAU ACCAA AAAUA CU U ||||||||||||||| || |||||| ||||||||| ||||||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| || GGGAGACAAGGUAUA AU CACAAA UCAAAACAG AUUCAGUUU AAGAGA UGAAACUGGUUCAAAUAUC UUUUA UGGUU UUUAU GA U GU UC - G G U U --------------GU -C ACA G |
| Stem-loop sequence | CCCUCUGUUUCAUAUUGUAUUGUGUUUUAGUUUUGUUGUAAGUCAAAAUUCUUUUACUUUGACCAAGUUUGUAGUAAAAUAAUUAACAUCUAAAAUACCAAAUAAAUACACUAUUGAGACAUAUUUCUUGGUUGAUUUUUCUAUAAACUUGGUCAAAGUUAGAGAAGUUUGACUUAGGACAAAACUAAACACCUUAUGAUAUGGAACAGAGGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK240675.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J033142I21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015785808.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g48730, chloroplastic (LOC4340271), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At5g48730, chloroplastic(LOC4340271) | coding protein | psRNATarget |
| 1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |
| 2 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |