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BaseInfo

ncRNA ID osa-miR1864
Species Oryza sativa
Class miRNA
Genome position Chr2:14949073-14949328 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 7 - UUGUAGUAACGUGAUGGUCAAUGU - 30
Stem-loop(if miRNA) -                            CCA      AGA    A    UG     A      C            AG AGG   GUUUGACCGGUGGGAGGGGGCUUUGACCGUUCUUUGACCGAAG
 ACUACACAUUGACCAUCGCGUUACUACG   UUCUUG   GACG GAAU  AAAAG GGUGGG GUGGGGGGAGGU  C   CGG                                           U
 ||||||||||||||||||||||||||||   ||||||   |||| ||||  ||||| |||||| ||||||||||||  |   |||
 UGAUGUGUAACUGGUAGUGCAAUGAUGU   AAGGAC   CUGU UUUG  UUUUC CCACCC CACCCCCCUCCA  G   UAC                                           G
A                            UAC      --G    G    GU     C      A            GA -AG   CCGGUUGGGUGGAGGGGGAGGGAUCCCGGGUUUUGGGUGGAGG
Stem-loop sequence ACUACACAUUGACCAUCGCGUUACUACGCCAUUCUUGAGAGACGAGAAUUGAAAAGAGGUGGGCGUGGGGGGAGGUAGCAGGCGGGUUUGACCGGUGGGAGGGGGCUUUGACCGUUCUUUGACCGAAGUGGGAGGUGGGUUUUGGGCCCUAGGGAGGGGGAGGUGGGUUGGCCCAUGAGAGACCUCCCCCCACACCCACCCCUUUUUGGUUUGUGUCGCAGGAACAUUGUAGUAACGUGAUGGUCAAUGUGUAGUA

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).