ncRNA ID | osa-miR1864 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:14949073-14949328 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 7 - UUGUAGUAACGUGAUGGUCAAUGU - 30 |
Stem-loop(if miRNA) |
-                            CCA      AGA    A    UG     A      C            AG AGG   GUUUGACCGGUGGGAGGGGGCUUUGACCGUUCUUUGACCGAAG  ACUACACAUUGACCAUCGCGUUACUACG   UUCUUG   GACG GAAU  AAAAG GGUGGG GUGGGGGGAGGU  C   CGG                                           U  ||||||||||||||||||||||||||||   ||||||   |||| ||||  ||||| |||||| ||||||||||||  |   |||  UGAUGUGUAACUGGUAGUGCAAUGAUGU   AAGGAC   CUGU UUUG  UUUUC CCACCC CACCCCCCUCCA  G   UAC                                           G A                            UAC      --G    G    GU     C      A            GA -AG   CCGGUUGGGUGGAGGGGGAGGGAUCCCGGGUUUUGGGUGGAGG |
Stem-loop sequence | ACUACACAUUGACCAUCGCGUUACUACGCCAUUCUUGAGAGACGAGAAUUGAAAAGAGGUGGGCGUGGGGGGAGGUAGCAGGCGGGUUUGACCGGUGGGAGGGGGCUUUGACCGUUCUUUGACCGAAGUGGGAGGUGGGUUUUGGGCCCUAGGGAGGGGGAGGUGGGUUGGCCCAUGAGAGACCUCCCCCCACACCCACCCCUUUUUGGUUUGUGUCGCAGGAACAUUGUAGUAACGUGAUGGUCAAUGUGUAGUA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |