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BaseInfo

ncRNA ID	osa-miR817
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:12276365-12276447 [-]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	5 - UCCAACUUGAGGCCCGAUUGA - 25
Stem-loop(if miRNA)	A             U              A UAUCUCAAUC GGCCUCAAGUUGG GUCCGUCAUGGAUG U |||||||||| ||||||||||||| |||||||||||||| G AUAGAGUUAG CCGGAGUUCAACC CGGGCAGUGCCUAC G           C             U              U
Stem-loop sequence	UAUCUCAAUCAGGCCUCAAGUUGGUGUCCGUCAUGGAUGAUGGUCAUCCGUGACGGGCUCCAACUUGAGGCCCGAUUGAGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779268.1	ncRNA:21   AGUUAGCCCGGAGUUCAACCU   1   |==|||**||||||||||||| targets:322   UUGAUCUUGCCUCAAGUUGGA   342 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280611 (LOC107280611), mRNA	uncharacterized LOC107280611(LOC107280611)	coding protein	psRNATarget
XM_015794509.1	ncRNA:21   AGUUAGCCCGGAGUUCAACCU   1   |==|||**||||||||||||| targets:342   UUGAUCUUGCCUCAAGUUGGA   362 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein FAR1-RELATED SEQUENCE 5 (LOC4345472), transcript variant X1, mRNA	protein FAR1-RELATED SEQUENCE 5(LOC4345472)	coding protein	psRNATarget
XM_015774234.1	ncRNA:21   AGUUAGCCCGGAGUUCAACCU   1   |==|||**||||||||||||| targets:935   UUGAUCUUGCCUCAAGUUGGA   955 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein FAR1-RELATED SEQUENCE 5-like (LOC107280351), mRNA	protein FAR1-RELATED SEQUENCE 5-like(LOC107280351)	coding protein	psRNATarget
AK073159.1	ncRNA:21   AGUUA-GCCCGGAGUUCAACCU   1   **|||-|*|||||||||||||| targets:1515   AAAAUGCCGGCCUCAAGUUGGA   1536 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J033003F09, full insert sequence	NA	coding protein	psRNATarget
XM_015774280.1	ncRNA:21   AGUUA-GCCCGGAGUUCAACCU   1   **|||-|*|||||||||||||| targets:1623   AAAAUGCCGGCCUCAAGUUGGA   1644 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At4g37170 (LOC4332177), mRNA	pentatricopeptide repeat-containing protein At4g37170(LOC4332177)	coding protein	psRNATarget

Reference

1	PMID:16959252 "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"; Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH; FEBS Lett. 580:5111-5116(2006).