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BaseInfo

ncRNA ID	osa-miR2928
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:6535928-6536127 [+]
Reference genome	MSU7
Source	miRBase
Length	20
Mature sequence(if miRNA)	97 - AAGAAGACGACAUUUUGUUG - 116
Stem-loop(if miRNA)	UUUUAUUUU  AA       C       GUUAAAAAAAA    A GU   ACGUCCCAGGUUUUGAUUAAAAGCUUCCAAAAUUUUAAGUUCUACAAAGAAGACGAC          GG  UGAAGGU AGACUUU           AUGA G  CAG                                                         A          ||  ||||||| |||||||           |||| |  |||          CC  AUUUCUA UUUGGAA           AAAG G  AUU                                                         U ----GGUCU  AG       C       ---------AA    - --   GUUUAAUCUUUUAUCUCGUAUACUACAGGUCUUUAUGGACGUUUACACUAGUUGUUU
Stem-loop sequence	UUUUAUUUUGGAAUGAAGGUCAGACUUUGUUAAAAAAAAAUGAAGGUCAGACGUCCCAGGUUUUGAUUAAAAGCUUCCAAAAUUUUAAGUUCUACAAAGAAGACGACAUUUUGUUGAUCACAUUUGCAGGUAUUUCUGGACAUCAUAUGCUCUAUUUUCUAAUUUGUUAGGAAAAAAAGGUUUCAUCUUUAGACCUCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069059.1	ncRNA:20   GUUGUUUUACAGCAGAAGAA   1   |||||||||||||||||||| targets:2069   CAACAAAAUGUCGUCUUCUU   2088 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023004K04, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:20131478 "Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses"; Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK; Mol Genet Genomics. 282:463-474(2009).