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BaseInfo

ncRNA ID osa-miR160a-3p
Species Oryza sativa
Class miRNA
Genome position Chr2:3511585-3511672 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 2 - GCGUGCAAGGAGCCAAGCAUG - 22
Stem-loop(if miRNA)       C       C          A  U    AC     CAUG
GUGUGC UGGCUCC UGUAUGCCAC CA GUAG  CAACC    G
|||||| ||||||| |||||||||| || ||||  |||||
CGUACG ACCGAGG ACGUGCGGUG GU CAUC  GUUGG    U
      A       A          G  -    -C     UCUG
Stem-loop sequence GUGUGCCUGGCUCCCUGUAUGCCACACAUGUAGACCAACCCAUGGUGUCUGGUUGCCUACUGGGUGGCGUGCAAGGAGCCAAGCAUGC

Reference

1 PMID:12101121
"MicroRNAs in plants";
Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP;
Genes Dev. 16:1616-1626(2002).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).