ncRNA ID | osa-miR5791 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:24374418-24374566 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 103 - UUGCAGGAGACUAGAGACCAG - 123 |
Stem-loop(if miRNA) |
U UCAGA G ---UAGA GCA U -A - A AG GG UU GCUGGU UGGAAGA UAAAAU UCUAGU UUGC AUGUU GGC CU GG GCACCA AAC C |||||| ||||||| |||||| |||||| |||| ||||| ||| || || |||||| ||| CGACUA ACUUUCU GUUUUA AGAUCA GACG UACGA UCG GG CC CGUGGU UUG C A -CUAA G CGACCAG GAG U AG A A -A -- UU |
Stem-loop sequence | UGCUGGUUCAGAUGGAAGAGUAAAAUUAGAUCUAGUGCAUUGCUAUGUUAGGCCUAGGAGGCACCAGGAACUUCCUUGUUUGGUGCACCAGGAGCUGAAGCAUUGCAGGAGACUAGAGACCAGCAUUUUGGUCUUUCAAAUCAUCAGCA |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |