ncRNA ID | osa-miR5519 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:24358353-24358422 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UGGCAGAAGUACUGGACUUAG - 31 |
Stem-loop(if miRNA) |
C U - UA -- G UGUGGGCGU GGCAGAA G CUGGA CUUAGC G ||||||||| ||||||| | ||||| |||||| ACGCCUGUA UCGUCUU C GACUU GGAUCG G U - A UC CG C |
Stem-loop sequence | CUGUGGGCGUUGGCAGAAGUACUGGACUUAGCGGGCGCUAGGGCUUCAGCUCAUUCUGCUAUGUCCGCAU |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |
2 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |