ncRNA ID | osa-miR5530 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:21782328-21782445 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - AGUGGUGUCGUAUUACCUGCC - 31 |
Stem-loop(if miRNA) |
A     G  G  UGGUGUCGUAUUACCUGCCCUUAUAGGACAUGAUGCAUCAUGCAUGC  CUGUU GC AG                                               A  ||||| || ||  GACGA UG AU                                               U G     -  -  UAAUAAUCAAAUGUAUGAUCUCCAUAGUAUAGUACGAGGGUCGGUAU |
Stem-loop sequence | ACUGUUGGCGAGUGGUGUCGUAUUACCUGCCCUUAUAGGACAUGAUGCAUCAUGCAUGCAUUAUGGCUGGGAGCAUGAUAUGAUACCUCUAGUAUGUAAACUAAUAAUUAGUAGCAGG |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |