ncRNA ID | osa-miR1882h |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:21511519-21511711 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 36 - AGAUUGCUUUCAAGGUCAUUUCUU - 59 |
Stem-loop(if miRNA) |
CA   -     AA   ---          C   U            U              U           -C   C     A  U     U   A   UGU CUAGA  UCU   GUUAUCGUUA CAA UUCCUAGAUUGC UUCAAGGUCAUUUC UUCUGAAACCC  GUU CCAUA AU CAGUA CCA A   ||| |||||  |||   |||||||||| ||| |||||||||||| |||||||||||||| |||||||||||  ||| ||||| || ||||| |||   ACG GAUCU  GGA   CAAUAGCAGU GUU GAGGAUCUAACG AGGUUCUAGUAAAG AAGACUUUGGG  UAA GGUAU UA GUUGU GGU G UA   U     GG   UUG          C   U            C              U           AA   A     C  U     U   C |
Stem-loop sequence | CAUGUCUAGAAAUCUGUUAUCGUUACCAAUUUCCUAGAUUGCUUUCAAGGUCAUUUCUUUCUGAAACCCCGUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGUUGUAUCUAUGGAAAUAAGGGUUUCAGAAUGAAAUGAUCUUGGACGCAAUCUAGGAGUUUGCUGACGAUAACGUUAGGGGUCUAGUGCAAU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |