| ncRNA ID | osa-miR1441 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr12:19485741-19485920 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 21 - ACCGGAUGUCGGAAAAGGUUU - 41 |
| Stem-loop(if miRNA) |
C C CC C A GG GUUUUUU AUUCGUGUC GAAAACU UUUUGAUAUCUGGU AAAC UUCGAUGUGACAUCUAAAAAUUUUCUUUUCGCGAACUAAG C ||||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| CAAAAAA UAAGCACAG CUUUUGG AAGGCUGUAGGCCA UUUG AGGCUACACUGUGGGUUUUUAAAAGAAAAGCGCUUGAUUU C A A AA A C GU |
| Stem-loop sequence | GUUUUUUCAUUCGUGUCCGAAAACUCCUUUUGAUAUCUGGUCAAACAUUCGAUGUGACAUCUAAAAAUUUUCUUUUCGCGAACUAAGGGCCUGUUUAGUUCGCGAAAAGAAAAUUUUUGGGUGUCACAUCGGACGUUUAACCGGAUGUCGGAAAAGGUUUUCAGACACGAAUAAAAAAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288305.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| CT831729.1 |
|
2.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117A02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015782675.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase ATL41 (LOC9269942), mRNA | E3 ubiquitin-protein ligase ATL41(LOC9269942) | coding protein | psRNATarget |
| 1 | PMID:18312648
"Identification of novel and candidate miRNAs in rice by high throughput sequencing"; Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK; BMC Plant Biol. 8:25(2008). |