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BaseInfo

ncRNA ID osa-miR2091-3p
Species Oryza sativa
Class miRNA
Genome position Chr12:19403368-19403453 [-]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 11 - CAUACAUUGCCUCCUAGGCUUG - 32
Stem-loop(if miRNA) -GA    AA       GAGG       C   CG    GU    GU
   GCUC  CCGAGCC    AGGAGGC AUG  UGCG  GGCU  G
   ||||  |||||||    ||||||| |||  ||||  ||||
   CGAG  GGUUCGG    UCCUCCG UAC  ACGU  CCGA  G
CGA    GC       ---A       U   AU    --    GA
Stem-loop sequence GAGCUCAACCGAGCCGAGGAGGAGGCCAUGCGUGCGGUGGCUGUGGAGAGCCUGCAUACAUUGCCUCCUAGGCUUGGCGGAGCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT836507.1
ncRNA:22   GUUCGGAUCCUCCGUUACAUAC   1
  ==|*|*||*|||||||||||||
targets:735   UGACCAUACGAGGCAAUGUAUG   756

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA249J02, full insert sequence NA coding protein psRNATarget

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).