ncRNA ID | osa-miR2091-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:19403368-19403453 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 11 - CAUACAUUGCCUCCUAGGCUUG - 32 |
Stem-loop(if miRNA) |
-GA    AA       GAGG       C   CG    GU    GU    GCUC  CCGAGCC    AGGAGGC AUG  UGCG  GGCU  G    ||||  |||||||    ||||||| |||  ||||  ||||    CGAG  GGUUCGG    UCCUCCG UAC  ACGU  CCGA  G CGA    GC       ---A       U   AU    --    GA |
Stem-loop sequence | GAGCUCAACCGAGCCGAGGAGGAGGCCAUGCGUGCGGUGGCUGUGGAGAGCCUGCAUACAUUGCCUCCUAGGCUUGGCGGAGCAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT836507.1 |
|
3.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA249J02, full insert sequence | NA | coding protein | psRNATarget |
1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |