Search result

BaseInfo

ncRNA ID	osa-miR2091-5p
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:19403368-19403453 [-]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	62 - UCAACCGAGCCGAGGAGGAGG - 82
Stem-loop(if miRNA)	-GA    AA       GAGG       C   CG    GU    GU    GCUC  CCGAGCC    AGGAGGC AUG  UGCG  GGCU  G    ||||  |||||||    ||||||| |||  ||||  ||||    CGAG  GGUUCGG    UCCUCCG UAC  ACGU  CCGA  G CGA    GC       ---A       U   AU    --    GA
Stem-loop sequence	GAGCUCAACCGAGCCGAGGAGGAGGCCAUGCGUGCGGUGGCUGUGGAGAGCCUGCAUACAUUGCCUCCUAGGCUUGGCGGAGCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015767415.1	ncRNA:21   GGAGGAGGAGCCGAGCCAACU   1   *=|||||||||*||||||||* targets:38   AUUCCUCCUCGCCUCGGUUGU   58 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group vesicle transport v-SNARE 13 (LOC4324687), mRNA	vesicle transport v-SNARE 13(LOC4324687)	coding protein	psRNATarget
AK102003.1	ncRNA:21   GGAGGAGGAGCCGAGCCAACU   1   *=|||||||||*||||||||* targets:3   AUUCCUCCUCGCCUCGGUUGU   23 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033079N06, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009).