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BaseInfo

ncRNA ID osa-miR5510
Species Oryza sativa
Class miRNA
Genome position Chr12:19127914-19128038 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 95 - AGGCUGAUCCACUCCAGAGGA - 115
Stem-loop(if miRNA) -    G  CA   G UG         A     G UU   U  - ACAGAUCCCCUCGAUUCAUU
 GUUG CU  AAG C  AUCCACUCC GAGGA G  UCG AG G                    G
 |||| ||  ||| |  ||||||||| ||||| |  ||| || |
 CGAC GA  UUC G  UAGGUGAGG CUCCU C  AAG UA C                    U
A    A  AC   G GU         A     A --   -  G CCUACUAGGUACUUGCUCAC
Stem-loop sequence GUUGGCUCAAAGGCUGAUCCACUCCAGAGGAGGUUUCGUAGGACAGAUCCCCUCGAUUCAUUGUCACUCGUUCAUGGAUCAUCCCGAUGAACAUCCUCAGGAGUGGAUUGGGCUUCAAGACAGCA

Reference

1 PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa";
Wei LQ, Yan LF, Wang T;
Genome Biol. 12:R53(2011).