ncRNA ID | osa-miR5510 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:19127914-19128038 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 95 - AGGCUGAUCCACUCCAGAGGA - 115 |
Stem-loop(if miRNA) |
-    G  CA   G UG         A     G UU   U  - ACAGAUCCCCUCGAUUCAUU  GUUG CU  AAG C  AUCCACUCC GAGGA G  UCG AG G                    G  |||| ||  ||| |  ||||||||| ||||| |  ||| || |  CGAC GA  UUC G  UAGGUGAGG CUCCU C  AAG UA C                    U A    A  AC   G GU         A     A --   -  G CCUACUAGGUACUUGCUCAC |
Stem-loop sequence | GUUGGCUCAAAGGCUGAUCCACUCCAGAGGAGGUUUCGUAGGACAGAUCCCCUCGAUUCAUUGUCACUCGUUCAUGGAUCAUCCCGAUGAACAUCCUCAGGAGUGGAUUGGGCUUCAAGACAGCA |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |