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BaseInfo

ncRNA ID osa-miR2101-5p
Species Oryza sativa
Class miRNA
Genome position Chr12:17986691-17986797 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 10 - ACAUGUUUACAAGUUAAAAUGU - 31
Stem-loop(if miRNA) -UCUUA  U    -       --A       A   GGAG     -G UAUACAACC
      UC CACA UGUUUAC   AGUUAAA UGU    CAGAG  G         C
      || |||| |||||||   ||||||| |||    |||||  |         A
      AG GUGU ACGAGUG   UCAAUUU GCA    GUCUC  G         A
UACCGG  C    U       AAC       A   ---A     AC GUUUGAACA
Stem-loop sequence UCUUAUCUCACAUGUUUACAAGUUAAAAUGUGGAGCAGAGGGUAUACAACCCAAACAAGUUUGGCACUCUGAACGAUUUAACUCAAGUGAGCAUUGUGCGAGGCCAU

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).