ncRNA ID | osa-miR2103 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:16852565-16852637 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 43 - UUUCCCUCUCCGUGCGCGCUCG - 64 |
Stem-loop(if miRNA) |
CGGC     -----        U   U   - ---G      G     GCCUU     UUUCCCUC CCG GCG C    CUCGCC G     |||||     |||||||| ||| ||| |    ||||||     CGGAG     AGAGGGAG GGC CGU G    GAGCGG C ----     AACAG        -   -   A GUAG      C |
Stem-loop sequence | CGGCGCCUUUUUCCCUCUCCGUGCGCGCUCGCCGGCCGGCGAGGAUGGAUGCCGGGAGGGAGAGACAAGAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015763573.1 |
|
0.0 | PREDICTED: Oryza sativa Japonica Group late embryogenesis abundant protein D-34-like (LOC107278683), transcript variant X1, mRNA | late embryogenesis abundant protein D-34-like(LOC107278683) | coding protein | psRNATarget |
1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |