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BaseInfo

ncRNA ID osa-miR2103
Species Oryza sativa
Class miRNA
Genome position Chr12:16852565-16852637 [-]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 43 - UUUCCCUCUCCGUGCGCGCUCG - 64
Stem-loop(if miRNA) CGGC     -----        U   U   - ---G      G
    GCCUU     UUUCCCUC CCG GCG C    CUCGCC G
    |||||     |||||||| ||| ||| |    ||||||
    CGGAG     AGAGGGAG GGC CGU G    GAGCGG C
----     AACAG        -   -   A GUAG      C
Stem-loop sequence CGGCGCCUUUUUCCCUCUCCGUGCGCGCUCGCCGGCCGGCGAGGAUGGAUGCCGGGAGGGAGAGACAAGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015763573.1
ncRNA:22   GCUCGCGCGUGCCUCUCCCUUU   1
  ||||||||||||||||||||||
targets:38   CGAGCGCGCACGGAGAGGGAAA   59

0.0 PREDICTED: Oryza sativa Japonica Group late embryogenesis abundant protein D-34-like (LOC107278683), transcript variant X1, mRNA late embryogenesis abundant protein D-34-like(LOC107278683) coding protein psRNATarget

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).