| ncRNA ID | osa-miR1861n |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr12:16586544-16586672 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 86 - CGAUCUUGUGGCAGGAGCUGAG - 107 |
| Stem-loop(if miRNA) |
-- G U C U A U CUC UUU GCGU UUGUAUAUUC UAGGC CGAUCUUG GGCAGGAGCUG GUAGC GGUGAA GC A |||| |||||||||| ||||| |||||||| ||||||||||| ||||| |||||| || UGUA AACGUAUAAG GUCUG GCUAGAAC CUGUCCUUGGC CAUCG UCACUU UG U AG - U A C A C ACU UUG |
| Stem-loop sequence | GCGUGUUGUAUAUUCUUAGGCCCGAUCUUGUGGCAGGAGCUGAGUAGCUGGUGAACUCGCUUUAUGUUGUUCAUUCACUCGCUACACGGUUCCUGUCCCAAGAUCGAGUCUGUGAAUAUGCAAAUGUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK072854.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023138A15, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015771199.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group galactoside 2-alpha-L-fucosyltransferase (LOC4330821), mRNA | galactoside 2-alpha-L-fucosyltransferase(LOC4330821) | coding protein | psRNATarget | |||||||||
| XM_015775321.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group exosome complex exonuclease RRP44 homolog A (LOC4331494), mRNA | exosome complex exonuclease RRP44 homolog A(LOC4331494) | coding protein | psRNATarget |
| 1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |