| ncRNA ID | osa-miR5805 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr12:13821490-13821896 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 374 - ACGAGUGAUGGCGGCGUAUACCUG - 397 |
| Stem-loop(if miRNA) |
- A A A A GA ---- A ---A -ACA GC -C G A -------------------AC A - GGCA - UG --C -- CAAUACACAAGCAAAAUAAUGAGGAUAGCUAGCGUUUGGGGAUGGGCCAGGCGGCCAACAU CG CAUCAGCACG GUG UGGCGGCGU UACCUGCGG AGGCGGC GGCGGC UG AGGU GGGGCAAGCAGCUGC GGCGCAG CU CUGG GC CUCCA GA CGUUGC C U UU UGC U G || |||||||||| ||| ||||||||| ||||||||| ||||||| |||||| || |||| ||||||||||||||| ||||||| || |||| || ||||| || |||||| | | || ||| | GU GUAGUUGUGC CAC GCUGCCGCA GUGGACGUC UCCGCUG CUGCCG AC UCCG CCCCGUUCGUCGACG UCGCGUC GA GGCC CG CUCGG CG CCGGUU G C CC GAC A A A C C C C -- UAGG C CACC CCUA -- AC G C CGCUCUUCUUGAAGCUACGGU A U ---- A -- ACA AC CCGGUAUAGGUACGUCAGGGUGAUGAAGACGGCCGCGUGUUCGUCGAGGUAGUAAUGGAGC |
| Stem-loop sequence | CGACAUCAGCACGAGUGAUGGCGGCGUAUACCUGCGGGAAGGCGGCGGCGGCAUGAAGGUACAGGGGCAAGCAGCUGCGCGGCGCAGCCUGCUGGAGCACCUCCAAGACGUUGCGGCACUUGUUCUGCUCAAUACACAAGCAAAAUAAUGAGGAUAGCUAGCGUUUGGGGAUGGGCCAGGCGGCCAACAUGACGAGGUAAUGAUGGAGCUGCUUGUGCGCCGGCAGAAGUAGUGGGACUGCAUGGAUAUGGCCACACAGACACCCAGUUGGCCUGCAGGCUCUGGCAUCGAAGUUCUUCUCGCGCCCCGGGAGCACUGCGCUGCAGCUGCUUGCCCCAUCCGCCUCCACCACGCCGUCGGAUGUCGCCUCUGCAGGUGCACGCCGUCGCCACCCGUGUUGAUGCUGA |
| 1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |