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BaseInfo

ncRNA ID osa-miR2092-3p
Species Oryza sativa
Class miRNA
Genome position Chr12:10116323-10116425 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 79 - ACCAGCAUUCCAUUGGCAGAGG - 100
Stem-loop(if miRNA) UUG     --    CU   -  C     U    CCC    GA     CACUACU
   AUCUC  CCAA  GAA GU GGUGU UACU   ACAA  UGAUA       A
   |||||  ||||  ||| || ||||| ||||   ||||  |||||       G
   UGGAG  GGUU  CUU CG CCACA AUGA   UGUU  ACUAU       U
-UG     AC    AC   A  A     C    ---    -A     UCCCACC
Stem-loop sequence UUGAUCUCCCAACUGAAGUCGGUGUUUACUCCCACAAGAUGAUACACUACUAGUCCACCCUUAUCAAUUGUAGUACACACCAGCAUUCCAUUGGCAGAGGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764025.1
ncRNA:22   GGAGACGGUUACCUUACGACCA   1
  ||||||||||||||||||||||
targets:1004   CCUCUGCCAAUGGAAUGCUGGU   1025

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276881 (LOC107276881), mRNA uncharacterized LOC107276881(LOC107276881) coding protein psRNATarget

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).