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BaseInfo

ncRNA ID osa-miR1439
Species Oryza sativa
Class miRNA
Genome position Chr12:10074109-10074280 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 132 - UUUUGGAACGGAGUGAGUAUU - 152
Stem-loop(if miRNA)    UG UUUG        G       AC      C           C         C       CUA        --U     CUA
UAU  U    UUAUAAAU UAAUACU  CUCCGU CCAAAAUAUAG CAUUUUUAG UAUGAAU   GACAUUGU   UUUAG   U
|||  |    |||||||| |||||||  |||||| ||||||||||| ||||||||| |||||||   ||||||||   |||||
AUA  G    GAUGUUUA AUUAUGA  GAGGCA GGUUUUAUAUU GUAAAAAUC AUACUUA   CUGUAACA   AGAUC   G
   GU UUUU        A       GU      A           C         A       AAC        UAC     UAA
Stem-loop sequence UAUUGUUUUGUUAUAAAUGUAAUACUACCUCCGUCCCAAAAUAUAGCCAUUUUUAGCUAUGAAUCUAGACAUUGUUUUUAGCUAUGAAUCUAGACAUACAAUGUCCAAAUUCAUAACUAAAAAUGCUUAUAUUUUGGAACGGAGUGAGUAUUAAAUUUGUAGUUUUGUGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK106501.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||||||=|||||||||
targets:470   UAUACUCACUCUGUUCCAAAA   490

1.5 Oryza sativa Japonica Group cDNA clone:002-105-E11, full insert sequence NA coding protein psRNATarget
AK102749.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||||||=|||||||||
targets:1800   UAUACUCACUCUGUUCCAAAA   1820

1.5 Oryza sativa Japonica Group cDNA clone:J033106K17, full insert sequence NA coding protein psRNATarget
XM_015792273.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||||||=|||||||||
targets:1750   UAUACUCACUCUGUUCCAAAA   1770

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343174 (LOC4343174), transcript variant X2, mRNA uncharacterized LOC4343174(LOC4343174) coding protein psRNATarget
XM_015792272.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||||||=|||||||||
targets:1840   UAUACUCACUCUGUUCCAAAA   1860

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343174 (LOC4343174), transcript variant X1, mRNA uncharacterized LOC4343174(LOC4343174) coding protein psRNATarget
AK100328.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||||||=|||||||||
targets:2151   UAUACUCACUCUGUUCCAAAA   2171

1.5 Oryza sativa Japonica Group cDNA clone:J023080A02, full insert sequence NA coding protein psRNATarget
XM_015758966.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*|||||||||||||
targets:3313   AAUACUCCCUCCGUUCCAAAA   3333

1.0 PREDICTED: Oryza sativa Japonica Group probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC107275831), mRNA probable leucine-rich repeat receptor-like protein kinase At1g35710(LOC107275831) coding protein psRNATarget
XM_015783567.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X3, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783582.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X17, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783581.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X16, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783580.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X15, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783566.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X2, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783575.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X10, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783574.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X9, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783573.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X8, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015783565.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  ==|||||||||||||=|||||
targets:919   GGUACUCACUCCGUUUCAAAA   939

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor HBP-1b(c38) (LOC4338933), transcript variant X1, mRNA transcription factor HBP-1b(c38)(LOC4338933) coding protein psRNATarget
XM_015769603.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*|||||||=|||||
targets:800   AAUACUCCCUCCGUUUCAAAA   820

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276404 (LOC107276404), mRNA uncharacterized LOC107276404(LOC107276404) coding protein psRNATarget
CT834759.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*|||||||=|||||
targets:721   AAUACUCCCUCCGUUUCAAAA   741

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130C21, full insert sequence NA coding protein psRNATarget
XM_015762280.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*=||||||||||||
targets:2248   AAUACUCCUUCCGUUCCAAAA   2268

2.5 PREDICTED: Oryza sativa Japonica Group F-box/FBD/LRR-repeat protein At1g13570 (LOC4350650), transcript variant X11, mRNA F-box/FBD/LRR-repeat protein At1g13570(LOC4350650) coding protein psRNATarget
XM_015770898.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  =||||||*|||||||||||||
targets:3493   GAUACUCCCUCCGUUCCAAAA   3513

1.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g65560 (LOC4329793), mRNA pentatricopeptide repeat-containing protein At5g65560(LOC4329793) coding protein psRNATarget
AK242718.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*|||||||||||||
targets:1834   UAUACUCCCUCCGUUCCAAAA   1854

1.0 Oryza sativa Japonica Group cDNA, clone: J090043O09, full insert sequence NA coding protein psRNATarget
AK062426.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||||=||||
targets:735   AGUACUCUCUCCGUUCUAAAA   755

2.5 Oryza sativa Japonica Group cDNA clone:001-102-H04, full insert sequence NA coding protein psRNATarget
CT830008.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||||=||||
targets:730   AGUACUCUCUCCGUUCUAAAA   750

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111K09, full insert sequence NA coding protein psRNATarget
XM_015778945.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||||=||||
targets:739   AGUACUCUCUCCGUUCUAAAA   759

2.5 PREDICTED: Oryza sativa Japonica Group CASP-like protein 1C1 (LOC4327789), mRNA CASP-like protein 1C1(LOC4327789) coding protein psRNATarget
CT833036.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  =|||||=*|||||||||||||
targets:1854   GAUACUUUCUCCGUUCCAAAA   1874

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN070K15, full insert sequence NA coding protein psRNATarget
XM_015782404.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*|||||||=|||||
targets:2517   AGUACUCCCUCCGUUUCAAAA   2537

2.5 PREDICTED: Oryza sativa Japonica Group MAR-binding filament-like protein 1 (LOC4337980), mRNA MAR-binding filament-like protein 1(LOC4337980) coding protein psRNATarget
XM_015769926.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*|||||||=|||||
targets:2434   AGUACUCCCUCCGUUUCAAAA   2454

2.5 PREDICTED: Oryza sativa Japonica Group metal-nicotianamine transporter YSL2 (LOC4330161), transcript variant X3, mRNA metal-nicotianamine transporter YSL2(LOC4330161) coding protein psRNATarget
XM_015769924.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*|||||||=|||||
targets:2471   AGUACUCCCUCCGUUUCAAAA   2491

2.5 PREDICTED: Oryza sativa Japonica Group metal-nicotianamine transporter YSL2 (LOC4330161), transcript variant X1, mRNA metal-nicotianamine transporter YSL2(LOC4330161) coding protein psRNATarget
AK065509.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||||=||||
targets:425   AGUACUCCCUCCGUUCUAAAA   445

2.5 Oryza sativa Japonica Group cDNA clone:J013027N08, full insert sequence NA coding protein psRNATarget
AK240800.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=||||||||||||*||||||
targets:234   UGUACUCACUCCGUACCAAAA   254

1.5 Oryza sativa Japonica Group cDNA, clone: J065002J06, full insert sequence NA coding protein psRNATarget
CT828194.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*|||||||=|||||
targets:733   UAUACUCCCUCCGUUUCAAAA   753

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124P14, full insert sequence NA coding protein psRNATarget
XM_015767700.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*|||||||=|||||
targets:3560   UAUACUCCCUCCGUUUCAAAA   3580

2.5 PREDICTED: Oryza sativa Japonica Group isoleucine--tRNA ligase, cytoplasmic (LOC9272464), mRNA isoleucine--tRNA ligase, cytoplasmic(LOC9272464) coding protein psRNATarget
AK243013.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*|||||||=|||||
targets:428   UAUACUCCCUCCGUUUCAAAA   448

2.5 Oryza sativa Japonica Group cDNA, clone: J090098F15, full insert sequence NA coding protein psRNATarget
AK288881.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*|||||||=|||||
targets:3059   UAUACUCCCUCCGUUUCAAAA   3079

2.5 Oryza sativa Japonica Group cDNA, clone: J090079G03, full insert sequence NA coding protein psRNATarget
XM_015760283.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *|||=||*|||||||||||||
targets:3277   UAUAUUCCCUCCGUUCCAAAA   3297

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271272 (LOC9271272), transcript variant X5, mRNA uncharacterized LOC9271272(LOC9271272) coding protein psRNATarget
XM_015760281.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *|||=||*|||||||||||||
targets:3450   UAUAUUCCCUCCGUUCCAAAA   3470

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271272 (LOC9271272), transcript variant X3, mRNA uncharacterized LOC9271272(LOC9271272) coding protein psRNATarget
XM_015760279.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *|||=||*|||||||||||||
targets:3464   UAUAUUCCCUCCGUUCCAAAA   3484

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271272 (LOC9271272), transcript variant X1, mRNA uncharacterized LOC9271272(LOC9271272) coding protein psRNATarget
XM_015760284.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *|||=||*|||||||||||||
targets:4070   UAUAUUCCCUCCGUUCCAAAA   4090

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271272 (LOC9271272), transcript variant X6, mRNA uncharacterized LOC9271272(LOC9271272) coding protein psRNATarget
AK100759.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:623   AAUACUCCCUCCGUCCCAAAA   643

2.5 Oryza sativa Japonica Group cDNA clone:J023119B10, full insert sequence NA coding protein psRNATarget
AK066842.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:920   AAUACUCCCUCCGUCCCAAAA   940

2.5 Oryza sativa Japonica Group cDNA clone:J013084A11, full insert sequence NA coding protein psRNATarget
AK288846.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||||||*||
targets:1202   AAUACUCCCUCCGUUCCAUAA   1222

2.5 Oryza sativa Japonica Group cDNA, clone: J090075E22, full insert sequence NA coding protein psRNATarget
XM_015784400.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:3517   AAUACUCCCUCCGUCCCAAAA   3537

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X13, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784401.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:3565   AAUACUCCCUCCGUCCCAAAA   3585

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X14, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784390.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:4090   AAUACUCCCUCCGUCCCAAAA   4110

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X4, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784399.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:4988   AAUACUCCCUCCGUCCCAAAA   5008

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X12, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784392.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5022   AAUACUCCCUCCGUCCCAAAA   5042

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X6, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784395.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X9, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784404.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X17, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784389.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784397.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X11, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784391.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X5, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784388.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784393.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X7, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784402.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X15, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784396.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5508   AAUACUCCCUCCGUCCCAAAA   5528

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X10, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784387.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784405.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |||||||*||||||*||||||
targets:5513   AAUACUCCCUCCGUCCCAAAA   5533

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X18, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
CT831842.1
ncRNA:21   UUAU-GAGUGAGGCAAGGUUUU   1
  |=||-|||*|||||||||||||
targets:1553   AGUAGCUCCCUCCGUUCCAAAA   1574

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248N23, full insert sequence NA coding protein psRNATarget
CT829655.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=||||=*|||||||||||||
targets:1010   UGUACUUCCUCCGUUCCAAAA   1030

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN066I22, full insert sequence NA coding protein psRNATarget
XM_015781539.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||||||=|||||
targets:2853   UGUACUCCCUCCGUUUCAAAA   2873

2.5 PREDICTED: Oryza sativa Japonica Group UMP-CMP kinase 2 (LOC4334909), transcript variant X1, mRNA UMP-CMP kinase 2(LOC4334909) coding protein psRNATarget
XM_015781540.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||||||=|||||
targets:2871   UGUACUCCCUCCGUUUCAAAA   2891

2.5 PREDICTED: Oryza sativa Japonica Group UMP-CMP kinase 2 (LOC4334909), transcript variant X2, mRNA UMP-CMP kinase 2(LOC4334909) coding protein psRNATarget
XM_015790712.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||||||=|||||
targets:2985   UGUACUCCCUCCGUUUCAAAA   3005

2.5 PREDICTED: Oryza sativa Japonica Group scar-like domain-containing protein WAVE 5 (LOC9267838), mRNA scar-like domain-containing protein WAVE 5(LOC9267838) coding protein psRNATarget
AK241441.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||||||=|||||
targets:2987   UGUACUCCCUCCGUUUCAAAA   3007

2.5 Oryza sativa Japonica Group cDNA, clone: J065162K07, full insert sequence NA coding protein psRNATarget
LQ236336.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  =||||||*||||||*||||||
targets:2   GAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2331 from Patent EP2985353 NA coding protein psRNATarget
JB164667.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  =||||||*||||||*||||||
targets:2   GAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2331 from Patent EP2559767 NA coding protein psRNATarget
HI404206.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  =||||||*||||||*||||||
targets:2   GAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2331 from Patent EP2074227 NA coding protein psRNATarget
AK106304.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||=|||||||||
targets:3821   UGUACUCCCUCUGUUCCAAAA   3841

2.5 Oryza sativa Japonica Group cDNA clone:002-101-C08, full insert sequence NA coding protein psRNATarget
XM_015791114.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||=|||||||||
targets:3928   UGUACUCCCUCUGUUCCAAAA   3948

2.5 PREDICTED: Oryza sativa Japonica Group protein NETWORKED 2A (LOC4344401), transcript variant X2, mRNA protein NETWORKED 2A(LOC4344401) coding protein psRNATarget
XM_015791113.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||=|||||||||
targets:3960   UGUACUCCCUCUGUUCCAAAA   3980

2.5 PREDICTED: Oryza sativa Japonica Group protein NETWORKED 2A (LOC4344401), transcript variant X1, mRNA protein NETWORKED 2A(LOC4344401) coding protein psRNATarget
AK100615.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *=|||||*|||=|||||||||
targets:4037   UGUACUCCCUCUGUUCCAAAA   4057

2.5 Oryza sativa Japonica Group cDNA clone:J023108B01, full insert sequence NA coding protein psRNATarget
XM_015765055.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=||=||*||||||||||||*
targets:5689   AGUAUUCCCUCCGUUCCAAAU   5709

3.0 PREDICTED: Oryza sativa Japonica Group probable mixed-linked glucan synthase 7 (LOC9266650), transcript variant X1, mRNA probable mixed-linked glucan synthase 7(LOC9266650) coding protein psRNATarget
XM_015788621.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||*||||||
targets:1263   AGUACUCCCUCCGUCCCAAAA   1283

2.5 PREDICTED: Oryza sativa Japonica Group LOB domain-containing protein 6 (LOC4327696), mRNA LOB domain-containing protein 6(LOC4327696) coding protein psRNATarget
CT832702.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |*|||||*||||||||=||||
targets:1287   ACUACUCCCUCCGUUCUAAAA   1307

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035G10, full insert sequence NA coding protein psRNATarget
AK067617.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||*||||||
targets:1985   AGUACUCCCUCCGUCCCAAAA   2005

2.5 Oryza sativa Japonica Group cDNA clone:J013109M02, full insert sequence NA coding protein psRNATarget
AK069433.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||*||||||
targets:2235   AGUACUCCCUCCGUCCCAAAA   2255

2.5 Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence NA coding protein psRNATarget
AK069433.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  **|||||*||||||||||*||
targets:264   CUUACUCCCUCCGUUCCAUAA   284

2.5 Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence NA coding protein psRNATarget
XM_015795330.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||*||||||
targets:2119   AGUACUCCCUCCGUCCCAAAA   2139

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345510 (LOC4345510), mRNA uncharacterized LOC4345510(LOC4345510) coding protein psRNATarget
AK066123.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*|||||||*|||||
targets:2345   AGUACUCUCUCCGUUACAAAA   2365

2.5 Oryza sativa Japonica Group cDNA clone:J013055A22, full insert sequence NA coding protein psRNATarget
AK063301.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  |=|||||*||||||*||||||
targets:524   AGUACUCCCUCCGUCCCAAAA   544

2.5 Oryza sativa Japonica Group cDNA clone:001-113-F03, full insert sequence NA coding protein psRNATarget
XM_015790734.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  **|||||*|||||||=|||||
targets:633   CCUACUCCCUCCGUUUCAAAA   653

2.5 PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC107281678), mRNA receptor-like protein 12(LOC107281678) coding protein psRNATarget
AK102081.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  **||||=*|||||||||||||
targets:1816   UUUACUUCCUCCGUUCCAAAA   1836

2.0 Oryza sativa Japonica Group cDNA clone:J033082K10, full insert sequence NA coding protein psRNATarget
XM_015760888.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  **|||||*|||||||=|||||
targets:2218   UUUACUCCCUCCGUUUCAAAA   2238

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107275703 (LOC107275703), mRNA uncharacterized LOC107275703(LOC107275703) coding protein psRNATarget
JB164847.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:2   CAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2511 from Patent EP2559767 NA coding protein psRNATarget
HI404386.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:2   CAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2511 from Patent EP2074227 NA coding protein psRNATarget
LQ236516.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:2   CAUACUCCCUCCGUCCCAAAA   22

2.5 Sequence 2511 from Patent EP2985353 NA coding protein psRNATarget
AK062793.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:177   CAUACUCCCUCCGUCCCAAAA   197

2.5 Oryza sativa Japonica Group cDNA clone:001-107-C05, full insert sequence NA coding protein psRNATarget
AK109291.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:574   CAUACUCCCUCCGUCCCAAAA   594

2.5 Oryza sativa Japonica Group cDNA clone:002-188-C10, full insert sequence NA coding protein psRNATarget
CT837777.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||*||||||||
targets:1016   UAUACUCCCUCCAUUCCAAAA   1036

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA054H08, full insert sequence NA coding protein psRNATarget
AK102017.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:874   UAUACUCCCUCCGUCCCAAAA   894

2.5 Oryza sativa Japonica Group cDNA clone:J033080F19, full insert sequence NA coding protein psRNATarget
XM_015763567.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:1367   UAUACUCCCUCCGUCCCAAAA   1387

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276434 (LOC107276434), mRNA uncharacterized LOC107276434(LOC107276434) coding protein psRNATarget
AK287611.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:1439   UAUACUCCCUCCGUCCCAAAA   1459

2.5 Oryza sativa Japonica Group cDNA, clone: J065059A09, full insert sequence NA coding protein psRNATarget
XM_015782022.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:1360   UAUACUCCCUCCGUCCCAAAA   1380

2.5 PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X1, mRNA zinc transporter 9(LOC4339080) coding protein psRNATarget
AK288085.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||*||||||||
targets:1259   CAUACUCCCUCCAUUCCAAAA   1279

2.5 Oryza sativa Japonica Group cDNA, clone: J075176I16, full insert sequence NA coding protein psRNATarget
AK068691.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:366   CAUACUCCCUCCGUCCCAAAA   386

2.5 Oryza sativa Japonica Group cDNA clone:J013162E13, full insert sequence NA coding protein psRNATarget
XM_015770646.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:1940   UAUACUCCCUCCGUCCCAAAA   1960

2.5 PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 46, chloroplastic (LOC4328128), mRNA protein DETOXIFICATION 46, chloroplastic(LOC4328128) coding protein psRNATarget
XM_015793611.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:2492   UAUACUCCCUCCGUCCCAAAA   2512

2.5 PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 5 (LOC9270038), mRNA wall-associated receptor kinase 5(LOC9270038) coding protein psRNATarget
XM_015782023.1
ncRNA:21   UUAUGAGUGAGGCAAGGUUUU   1
  *||||||*||||||*||||||
targets:2402   UAUACUCCCUCCGUCCCAAAA   2422

2.5 PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X2, mRNA zinc transporter 9(LOC4339080) coding protein psRNATarget

Reference

1 PMID:18312648
"Identification of novel and candidate miRNAs in rice by high throughput sequencing";
Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK;
BMC Plant Biol. 8:25(2008).
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