ncRNA ID | osa-miR5810 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:7333292-7333419 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - ACGGAACCCUAAUGGCGAUGGCAU - 34 |
Stem-loop(if miRNA) |
G  CU           UU  U   C             AG  A   --U  AU   --     AUAG  UG  UCAUAAAUGCU  UC CCA UUAGGGUUCCGUU  CA CCC   CC  UAA  GUACU    G  ||  |||||||||||  || ||| |||||||||||||  || |||   ||  |||  |||||    A  AC  GGUAUUUACGG  AG GGU AAUCCCAAGGCAG  GU GGG   GG  AUU  CGUGA    U -  AG           -U  C   -             --  A   UGU  CU   UA     CAAG |
Stem-loop sequence | GUGCUUCAUAAAUGCUUUUCUCCACUUAGGGUUCCGUUAGCAACCCUCCAUUAAGUACUAUAGGAUGAACAGUGCAUUUAUCGGUGUGGGAUGGACGGAACCCUAAUGGCGAUGGCAUUUAUGGGACA |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |