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BaseInfo

ncRNA ID	osa-miR1863b.2
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:4867257-4867616 [+]
Reference genome	MSU7
Source	miRBase
Length	23
Mature sequence(if miRNA)	329 - AGAGACUUGGCUGAUGCAUUACU - 351
Stem-loop(if miRNA)	-----   U  C             C     C  C       -                 -------A     A    AAUGAAU  UUAU       CAAUCCCC      -- A     UGUAGCUCUCGGGGCAGUACCUAAUCCGCUGCUGAUCUGUUUCUAGUCAUGAAAAGCACUGUGAUCUGUAA      CAA AG AAUGCAUCAGUUA GUUUC UA AUAGUUA CAUGGUAUCAGAGCUGA        AUCCU AACC       GU    CCAGCAC        UGCUGC  U GGAGC                                                                       G      ||| || ||||||||||||| ||||| || ||||||| |||||||||||||||||        ||||| ||||       ||    |||||||        ||||||  | |||||                                                                       U      GUU UC UUACGUAGUCGGU CAGAG AU UGUCAAU GUACCAUAGUCUCGAUU        UAGGA UUGG       CA    GGUUGUG        UUAGGU  U GACUA                                                                       G CAAAG   U  A             U     -  U       U                 GUCGAUUC     G    ---GGUU  UCUC       -------U      AG -     AUAACGUAGUGACAGUCCAGUGCUUAGGUUGCUACCGGUAUCUUAACCCGUUUUGGUACCGUACGUCGUUC
Stem-loop sequence	CAAUAGCAAUGCAUCAGUUACGUUUCCUACAUAGUUACAUGGUAUCAGAGCUGAAAUCCUAAACCAAUGAAUGUUUAUCCAGCACCAAUCCCCUGCUGCUAGGAGCUGUAGCUCUCGGGGCAGUACCUAAUCCGCUGCUGAUCUGUUUCUAGUCAUGAAAAGCACUGUGAUCUGUAAGUGCUUGCUGCAUGCCAUGGUUUUGCCCAAUUCUAUGGCCAUCGUUGGAUUCGUGACCUGACAGUGAUGCAAUAAUCAGUGAUGGAUUUGUGUUGGCUCUACUUGGGGUUGAGGAUCUUAGCUGUUAGCUCUGAUACCAUGUUAACUGUUUAGAGACUUGGCUGAUGCAUUACUUUUGGAAAC

Reference

1	PMID:19903869 "Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009).
2	PMID:21525786 "Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011).