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BaseInfo

ncRNA ID	osa-miR1846c-3p
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:270780-270865 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	49 - UGACCCCGGUCUGCUCGCUGG - 69
Stem-loop(if miRNA)	-AUGA  C         C        G         C     A      GC GCCGGAUCU CCAGUGAG AGGCCGGGG CGCUG A      || ||||||||| |||||||| ||||||||| |||||      CG CGGCCUAGG GGUCGCUC UCUGGCCCC GUGGC U AGAAA  -         C        G         A     C
Stem-loop sequence	AUGAGCCGCCGGAUCUCCCAGUGAGGAGGCCGGGGCCGCUGAAUCCGGUGACCCCGGUCUGCUCGCUGGCGGAUCCGGCGCAAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015788781.1	ncRNA:21   GGUCGCUCGUCUGGCCCCAGU   1   |*|||||*||||||*|||||| targets:553   CGAGCGAACAGACCAGGGUCA   573 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271825 (LOC9271825), mRNA	uncharacterized LOC9271825(LOC9271825)	coding protein	psRNATarget
AK318608.1	ncRNA:21   GGUCGCUCGUCUGGCCCCAGU   1   |*|||||*||||||*|||||| targets:557   CGAGCGAACAGACCAGGGUCA   577 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100078N21, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).
2	PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009).