ncRNA ID | osa-miR1846c-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:270780-270865 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 20 - AGUGAGGAGGCCGGGGCCGCU - 40 |
Stem-loop(if miRNA) |
-AUGA  C         C        G         C     A      GC GCCGGAUCU CCAGUGAG AGGCCGGGG CGCUG A      || ||||||||| |||||||| ||||||||| |||||      CG CGGCCUAGG GGUCGCUC UCUGGCCCC GUGGC U AGAAA  -         C        G         A     C |
Stem-loop sequence | AUGAGCCGCCGGAUCUCCCAGUGAGGAGGCCGGGGCCGCUGAAUCCGGUGACCCCGGUCUGCUCGCUGGCGGAUCCGGCGCAAAGA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |
2 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |