ncRNA ID | osa-miR1846b-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:27715822-27715933 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 60 - AGUGAGGAGGCCGGGGCCGCU - 80 |
Stem-loop(if miRNA) |
-C  C   CUACCAAU    CG        C  A        GC     C     G   CG UCC        GAGC  CCGGAUCU CC GUGAGGAG  CGGGG CGCUG A   || |||        ||||  |||||||| || ||||||||  ||||| |||||   GC AGG        CUCG  GGCCUAGG GG CGCUCCUC  GCCCC GUGAC U GA  A   AAAGAGAC    -A        C  C        UU     A     C |
Stem-loop sequence | CCGCUCCCUACCAAUGAGCCGCCGGAUCUCCCAGUGAGGAGGCCGGGGCCGCUGGAUCCAGUGACCCCGUUCUCCUCGCCGGCGGAUCCGGAGCUCCAGAGAAAGGAACGAG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |
2 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |