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BaseInfo

ncRNA ID	osa-miR5822
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:26335769-26335976 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	178 - UGUCUGCUCGAUGUCAGGUUG - 198
Stem-loop(if miRNA)	-   U G  AG --      -    CCCAAAAA     -    ----C UGGGGACUCAUAUGCACAGCAGCAUGAGUAAAAUGUUGCACCUUGGGAGUGAG GCCCCUU UGC A CU  C  UGAGCA ACAG        CAAGG AUGU     U                                                     A ||||||| ||| | ||  |  |||||| ||||        ||||| ||||     |                                                     G UGGGGAG GCG U GA  G  GCUCGU UGUC        GUUCC UACG     C                                                     G        U   U G  CU UA      C    ----ACUA     A    UAUAA UGUUUUGACUUAAGGCCUACGGAGUGUACGAAUUAAUAUAACCUAACGUUUAC
Stem-loop sequence	GCCCCUUUGCUAGCUAGCUGAGCAACAGCCCAAAAACAAGGAUGUCUUGGGGACUCAUAUGCACAGCAGCAUGAGUAAAAUGUUGCACCUUGGGAGUGAGAGGCAUUUGCAAUCCAAUAUAAUUAAGCAUGUGAGGCAUCCGGAAUUCAGUUUUGUCAAUAUGCAUACCUUGAUCACUGUCUGCUCGAUGUCAGGUUGCGUGAGGGGU

Reference

1	PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011).