ncRNA ID | osa-miR5800 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:24921149-24921241 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 2 - CCCGGCUAUCGGAACGGCUGC - 22 |
Stem-loop(if miRNA) |
     GAUA  -A     UA    UGAGAG   UCA      -C    U AGCAG    UC  AUAGC  GGAU      GCA   GGAGAG  ACCU C |||||    ||  |||||  ||||      |||   ||||||  |||| A UCGUC    AG  UAUCG  CCUA      CGU   CCUUUC  UGGG A      GGCA  GC     GC    ------   CUA      AA    C |
Stem-loop sequence | AGCAGGAUAUCAAUAGCUAGGAUUGAGAGGCAUCAGGAGAGCACCUUCAACGGGUAACUUUCCAUCUGCAUCCCGGCUAUCGGAACGGCUGCU |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |