ncRNA ID | osa-miR5793 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:24288999-24289076 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 4 - CGAGGACGAGAUACAGUGCAG - 24 |
Stem-loop(if miRNA) |
   -C  --        UACA     -   UCGC    C  A ACC  GA  GGACGAGA    GUGCA GCA    GGGA GG A |||  ||  ||||||||    ||||| |||    |||| || UGG  CU  CCUGUUCU    CAUGU CGU    UCCU UC A    UC  AC        CUUC     G   ---U    -  U |
Stem-loop sequence | ACCCGAGGACGAGAUACAGUGCAGCAUCGCGGGACGGAAAUCUUCCUUUGCGUGUACCUUCUCUUGUCCCAUCCUGGU |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |