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BaseInfo

ncRNA ID	osa-miR1855
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:21708971-21709080 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	80 - AGCACUGGAGUAGCCAAGAGA - 100
Stem-loop(if miRNA)	--CCUCC            CUC    C C       G    U  U U    CCCAA        CCAUUUCUUGGC   CUCU G UGCUCCU CUUG GC C GAGC     C        ||||||||||||   |||| | ||||||| |||| || | ||||     U        GGUAGAGAACCG   GAGG C ACGAGGA GAAC CG G CUCG     G AGCGUGA            -AU    U -       G    U  U -    UACUC
Stem-loop sequence	CCUCCCCAUUUCUUGGCCUCCUCUCGCUGCUCCUGCUUGUGCUCUGAGCCCCAACUGCUCAUGCUCGUGCUCAAGGAGGAGCACUGGAGUAGCCAAGAGAUGGAGUGCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK109729.1	ncRNA:21   AGAGAACCGAUGAGGUCACGA   1   *||*||||||||||||*|||| targets:1282   GCUGUUGGCUACUCCAAUGCU   1302 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-146-B11, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).