ncRNA ID | osa-miR5823 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:21506677-21506783 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AAGGAAUUGGGUCUAAUCUCUUCC - 34 |
Stem-loop(if miRNA) |
U     A  U  U    C           G    UG     GCUAUAAAU     U  GUUUG AU GG GGGG UUAGGCUUAAU CCUU  GAUGG         GGAAU A  ||||| || || |||| ||||||||||| ||||  |||||         |||||  CAAAC UA CC UCUC AAUCUGGGUUA GGAA  CUAUC         CCUUG A A     C  U  U    U           A    GU     -------AC     A |
Stem-loop sequence | UGUUUGAAUUGGUGGGGCUUAGGCUUAAUGCCUUUGGAUGGGCUAUAAAUGGAAUUAAAGUUCCCACUAUCUGAAGGAAUUGGGUCUAAUCUCUUCCUAUCCAAACA |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |