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BaseInfo

ncRNA ID osa-miR1882g
Species Oryza sativa
Class miRNA
Genome position Chr11:20828609-20828766 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 21 - AGAUUGCUUUCAAGGUCAUUUCUU - 44
Stem-loop(if miRNA) U         C   CA           U              U       C   --         A  U     U   A
 UUAUCGUUA CAA  UCCUAGAUUGC UUCAAGGUCAUUUC UUAUGGA CCC  AUUCCCAUA AU CAGUA CCA A
 ||||||||| |||  ||||||||||| |||||||||||||| ||||||| |||  ||||||||| || ||||| |||
 AAUAGUAGU GUU  AGGAUCUAACG AGGUUCUAGUAAAG AAUACCU GGG  UAAGGGUAU UA GUCGU GGU G
C         C   UG           C              C       U   AA         C  U     U   A
Stem-loop sequence UUUAUCGUUACCAACAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAUGGACCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGCUGUAUCUAUGGGAAUAAGGGUUCCAUAACGAAAUGAUCUUGGACGCAAUCUAGGAGUUUGCUGAUGAUAAC

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).