| ncRNA ID | osa-miR535-3p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:16290530-16290623 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 4 - GUGCUUUCUCCCGUUGUCACU - 24 |
| Stem-loop(if miRNA) |
A C ----- U A U GGCGGUGACAACG GAGAGAGCACGC GGUGCG GCGG C CGG G ||||||||||||| |||||||||||| |||||| |||| | ||| CCGUCACUGUUGC CUCUUUCGUGCG CCAUGC CGCC G GCC A C U GGCGG C - G |
| Stem-loop sequence | GGCGGUGACAACGAGAGAGAGCACGCCGGUGCGGCGGUCACGGUGAGCCGGCCCGCGGCGGCGUACCUGCGUGCUUUCUCCCGUUGUCACUGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK062367.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-101-H12, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:16146523
"Cloning and characterization of micro-RNAs from moss"; Arazi T, Talmor-Neiman M, Stav R, Riese M, Huijser P, Baulcombe DC; Plant J. 43:837-848(2005). |
| 2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |