| ncRNA ID | osa-miR2100-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:16194999-16195151 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 127 - UUCUCUCAAGUUGCCAAACAAG - 148 |
| Stem-loop(if miRNA) |
U - U AG - A CAA CAA -- AA GUAGGGUGGGUGGGGAAGAUCGGAAGAAGCG UCCC UUCUC CA UUGCC AAACA GC GUUGC A C GCC G |||| ||||| || ||||| ||||| || ||||| | | ||| AGGG GAGGG GU GGCGG UUUGU CG CAAUG C U UCU C A U - GA A - --C --U UU -C AGCCAUUUUUCUUUUUUUUAUCGCUAGCUCA |
| Stem-loop sequence | UUCCCUUCUCUCAAGUUGCCAAACAAGCCAAGUUGCCAAACAAGCCGUAGGGUGGGUGGGGAAGAUCGGAAGAAGCGGCACUCGAUCGCUAUUUUUUUUCUUUUUACCGAUCUCUUUCUGUAACCGCUGUUUAGGCGGAGUGGGGAGUGGGAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK107188.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-124-H11, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |