ncRNA ID | osa-miR1883a |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:13523520-13523637 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 22 - ACCUGUGACGGGCCGAGAAUGGAA - 45 |
Stem-loop(if miRNA) |
--AC       U                      GC                  A   G     CCGUCAC GGUAUCUAGUCACCUGUGACGG  CGAGAAUGGAACCCGUCA AGG A     ||||||| ||||||||||||||||||||||  |||||||||||||||||| |||     GGCAGUG CCGUAGAUCAGUGGACACUGCC  GCUCUUACCUUGGGCAGU UCC C GCCC       U                      UA                  C   A |
Stem-loop sequence | ACCCGUCACUGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAACCCGUCAAAGGGACACCUCUGACGGGUUCCAUUCUCGAUCCGUCACAGGUGACUAGAUGCCUGUGACGGCCCG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |