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BaseInfo

ncRNA ID osa-miR1883a
Species Oryza sativa
Class miRNA
Genome position Chr11:13523520-13523637 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 22 - ACCUGUGACGGGCCGAGAAUGGAA - 45
Stem-loop(if miRNA) --AC       U                      GC                  A   G
    CCGUCAC GGUAUCUAGUCACCUGUGACGG  CGAGAAUGGAACCCGUCA AGG A
    ||||||| ||||||||||||||||||||||  |||||||||||||||||| |||
    GGCAGUG CCGUAGAUCAGUGGACACUGCC  GCUCUUACCUUGGGCAGU UCC C
GCCC       U                      UA                  C   A
Stem-loop sequence ACCCGUCACUGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAACCCGUCAAAGGGACACCUCUGACGGGUUCCAUUCUCGAUCCGUCACAGGUGACUAGAUGCCUGUGACGGCCCG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).