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BaseInfo

ncRNA ID osa-miR5159
Species Oryza sativa
Class miRNA
Genome position Chr11:11920712-11920787 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 51 - AACUAGAGUGGGUCAACGGGUACC - 74
Stem-loop(if miRNA) --U             G                 CCAA
   GUACCUGUUGACU ACUCUGGUUCAACAAAA    U
   ||||||||||||| |||||||||||||||||
   CAUGGGCAACUGG UGAGAUCAAGUUGUUUU    U
ACC             G                 CAUU
Stem-loop sequence UGUACCUGUUGACUGACUCUGGUUCAACAAAACCAAUUUUACUUUUGUUGAACUAGAGUGGGUCAACGGGUACCCA

Reference

1 PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus";
Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D;
RNA Biol. 8:538-547(2011).
2 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).