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BaseInfo

ncRNA ID osa-miR1882f
Species Oryza sativa
Class miRNA
Genome position Chr11:11073482-11073641 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 22 - AGAUUGCUUUCAAGGUCAUUUCUU - 45
Stem-loop(if miRNA) U         AC   U    U       U              U     G     -C         A  U     U   A
 GUUAUCGUU  CAA AUCC AGAUUGC UUCAAGGUCAUUUC UUAGG AACCC  AUUCCCAUA AU CAGUA CCA A
 |||||||||  ||| |||| ||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||
 CAAUAGCAG  GUU UAGG UCUAACG AGGUUCUAGUAAAG AAUCC UUGGG  UAAGGGUAU UA GUCGU GGU G
G         GC   U    U       U              C     -     AA         C  U     U   C
Stem-loop sequence UGUUAUCGUUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGCUGUAUCUAUGGGAAUAAGGGUUCCUAACGAAAUGAUCUUGGAUGCAAUCUUGGAUUUUGCGGACGAUAACG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).