ncRNA ID | osa-miR1882f |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:11073482-11073641 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 22 - AGAUUGCUUUCAAGGUCAUUUCUU - 45 |
Stem-loop(if miRNA) |
U         AC   U    U       U              U     G     -C         A  U     U   A  GUUAUCGUU  CAA AUCC AGAUUGC UUCAAGGUCAUUUC UUAGG AACCC  AUUCCCAUA AU CAGUA CCA A  |||||||||  ||| |||| ||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||  CAAUAGCAG  GUU UAGG UCUAACG AGGUUCUAGUAAAG AAUCC UUGGG  UAAGGGUAU UA GUCGU GGU G G         GC   U    U       U              C     -     AA         C  U     U   C |
Stem-loop sequence | UGUUAUCGUUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGCUGUAUCUAUGGGAAUAAGGGUUCCUAACGAAAUGAUCUUGGAUGCAAUCUUGGAUUUUGCGGACGAUAACG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |