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BaseInfo

ncRNA ID osa-miR1856
Species Oryza sativa
Class miRNA
Genome position Chr11:10376148-10376296 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 119 - UAUGCGUAAGACGGAUUCGUA - 139
Stem-loop(if miRNA) --    CACU         AA             U  C         CCAUAUCAU    ACC   CACCGUCUUUAGCU
  AGAG    GCUAUGCGU  GACGGAUUCGUAC AC UGCGUCCGA         GUGC   GAU              U
  ||||    |||||||||  ||||||||||||| || |||||||||         ||||   |||
  UCUU    CGAUACGCA  CUGCCUAAGCAUG UG ACGUAGGCU         UACG   CGA              C
UU    UUAU         GG             C  U         ---------    --A   ACGUAACCACCUCU
Stem-loop sequence AGAGCACUGCUAUGCGUAAGACGGAUUCGUACUACCUGCGUCCGACCAUAUCAUGUGCACCGAUCACCGUCUUUAGCUUCUCUCCACCAAUGCAAGCAGCAUUCGGAUGCAUGUCGUACGAAUCCGUCGGACGCAUAGCUAUUUUCUUU

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).