ncRNA ID | osa-miR1856 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:10376148-10376296 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 119 - UAUGCGUAAGACGGAUUCGUA - 139 |
Stem-loop(if miRNA) |
-- CACU AA U C CCAUAUCAU ACC CACCGUCUUUAGCU AGAG GCUAUGCGU GACGGAUUCGUAC AC UGCGUCCGA GUGC GAU U |||| ||||||||| ||||||||||||| || ||||||||| |||| ||| UCUU CGAUACGCA CUGCCUAAGCAUG UG ACGUAGGCU UACG CGA C UU UUAU GG C U --------- --A ACGUAACCACCUCU |
Stem-loop sequence | AGAGCACUGCUAUGCGUAAGACGGAUUCGUACUACCUGCGUCCGACCAUAUCAUGUGCACCGAUCACCGUCUUUAGCUUCUCUCCACCAAUGCAAGCAGCAUUCGGAUGCAUGUCGUACGAAUCCGUCGGACGCAUAGCUAUUUUCUUU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |