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BaseInfo

ncRNA ID osa-miR5528
Species Oryza sativa
Class miRNA
Genome position Chr11:9586987-9587059 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - AAGACGGUUUUAGAUGUUGCC - 31
Stem-loop(if miRNA) G  -     UUU         -UU   AAG    -  UA
 AC AUCAG   GCAGUAUCU   ACC   GUCU GG  C
 || |||||   |||||||||   |||   |||| ||
 UG UAGUC   CGUUGUAGA   UGG   CAGA CC  U
-  C     CUC         UUU   ---    A  CG
Stem-loop sequence GACAUCAGUUUGCAGUAUCUUUACCAAGGUCUGGUACUGCCCAAGACGGUUUUAGAUGUUGCCUCCUGAUCGU

Reference

1 PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa";
Wei LQ, Yan LF, Wang T;
Genome Biol. 12:R53(2011).