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BaseInfo

ncRNA ID osa-miR1883b
Species Oryza sativa
Class miRNA
Genome position Chr11:9367993-9368128 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 84 - ACCUGUGACGGGCCGAGAAUGGAA - 107
Stem-loop(if miRNA) --C      A                             C    C A   -       C U      AA
   GGUUGC GCCCGUCACAGGUAUCUAGUCACCUGUGA GGGC G GAA UGGAAUC G CAAAGG  C
   |||||| ||||||||||||||||||||||||||||| |||| | ||| ||||||| | ||||||
   UCAACG CGGGCAGUGUCCAUAGAUCAGUGGACACU CCCG C CUU AUCUUAG C GUUUCC  A
CAU      C                             A    U -   C       A U      AC
Stem-loop sequence CGGUUGCAGCCCGUCACAGGUAUCUAGUCACCUGUGACGGGCCGAGAAUGGAAUCCGUCAAAGGAACACACCUUUGUCAGAUUCUACUUCCUGCCCAUCACAGGUGACUAGAUACCUGUGACGGGCCGCAACUUAC

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).