ncRNA ID | osa-miR440 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:9164805-9164924 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 23 - AGUGUCUCCUGAUGAUCGGGACAA - 46 |
Stem-loop(if miRNA) |
      A UG      C   G  C          C        U     CAA  -    CC AUUGCU U  UUGGUG UGG CU GUCCUGAUCA UAGGAGAC CUGAU   GC UAGG  U |||||| |  |||||| ||| || |||||||||| |||||||| |||||   || |||| UAGCGA A  AGCCAC AUC GA CAGGGCUAGU GUCCUCUG GAUUA   UG AUUC  A       G GU      A   G  A          A        U     ---  U    AA |
Stem-loop sequence | AUUGCUAUUGUUGGUGCUGGGCUCGUCCUGAUCACUAGGAGACUCUGAUCAAGCUAGGCCUAAACUUAUGUAUUAGUGUCUCCUGAUGAUCGGGACAAGGCUAACACCGAUGAGAGCGAU |
1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |