| ncRNA ID | osa-miR2118q |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:7810709-7810885 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 39 - UUCCCGAUGCCUCCUAUUCCUA - 60 |
| Stem-loop(if miRNA) |
--- AAA A CU G A -A G A C GA U CU AG GUGAGC AGGGAAGAGGAAG GAG GCCU AAGA CG UGGGAAUAGGA CAU G GGAAAGC U AGC AAAUUUU ACUCC U |||||| ||||||||||||| ||| |||| |||| || ||||||||||| ||| | ||||||| | ||| ||||||| ||||| UACUCG UUCCUUCUCCUUC CUC UGGA UUCU GC AUCCUUAUCCU GUA C CCUUUUG G UCG UUUAAAG UGAGG A AAU --- A -- A C CC G - C UC - AU CU |
| Stem-loop sequence | GUGAGCAGGGAAGAGGAAGAAAGAGAGCCUCUAAGAGCGAUGGGAAUAGGAACAUGGAGGAAAGCCUGAAGCUAAAUUUUCUACUCCAGUAUCGGAGUUAGAAAUUUGCUCUGCGUUUUCCCGAUGCCUCCUAUUCCUACCGAUCUUAGGUACUCCUUCCUCUUCCUUUAAGCUCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK068680.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |