| ncRNA ID | osa-miR5790 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:7740052-7740134 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 60 - AAGACGAUCCUAGCAGAGCUUCAU - 83 |
| Stem-loop(if miRNA) |
UCC C AG CAU -CC ---C GU AAGACGA UAG AG CUU CU ACUCCA AG A ||||||| ||| || ||| || |||||| || UUCUGCU AUC UC GAG GA UGGGGU UC A UCA - CU UCC AUA CAAC AA |
| Stem-loop sequence | AAGACGAUCCUAGCAGAGCUUCAUCUCCACUCCACAGGUAAAACUCAACUGGGGUAUAAGCCUGAGUCCUCUAACUUCGUCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK119401.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-132-E04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015792293.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268276 (LOC9268276), mRNA | uncharacterized LOC9268276(LOC9268276) | coding protein | psRNATarget |
| 1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |