| ncRNA ID | osa-miR2872 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:2524994-2525353 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 331 - UGGGGUUCUACAAACCGAACU - 351 |
| Stem-loop(if miRNA) |
CUUAGA UCA UA U U UGAUU C A GCAACAGGAUGCUCGAUCUUCCAUCAGGUAAAGAUAACUCUUGAUUUGGCGAAAACUUGUCACACAUGAUUUGACUUUCGAUCAACACGAUCUAAACUUGCAAUUUCAG UUAUU UAGUUCGGUUUGUAGAA CCA CUUCGAGU CU AAUCA UCAUCUGCAAUUG UG C ||||| ||||||||||||||||| ||| |||||||| || ||||| ||||||||||||| || AGUGG AUCAAGCCAAACAUCUU GGU GAAGCUCA GA UUAGU AGUAGACGUUAAC CG A -----A -UG GG U C ----U A U AUGUUAGAUGGAAAAAGAACGAACAUAAGAAGCUAAGCGUACGUUCCUAAUCGGAAGAGUCACUUCCGGUUAGUCUAAAGCCGUGCCAACCAUUGAUCUUUUCUGUACC |
| Stem-loop sequence | CUUAGAUUAUUUCAUAGUUCGGUUUGUAGAAUACCAUCUUCGAGUUCUUGAUUAAUCACUCAUCUGCAAUUGAUGGCAACAGGAUGCUCGAUCUUCCAUCAGGUAAAGAUAACUCUUGAUUUGGCGAAAACUUGUCACACAUGAUUUGACUUUCGAUCAACACGAUCUAAACUUGCAAUUUCAGCACCAUGUCUUUUCUAGUUACCAACCGUGCCGAAAUCUGAUUGGCCUUCACUGAGAAGGCUAAUCCUUGCAUGCGAAUCGAAGAAUACAAGCAAGAAAAAGGUAGAUUGUAGCUCAAUUGCAGAUGAAUGAUUUAGCACUCGAAGUUGGGGUUCUACAAACCGAACUAGUGGUGAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK106928.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-119-B12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK063801.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-121-F08, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |