| ncRNA ID | osa-miR1319a |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:702071-702191 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 74 - AACCGGCAUCUGUAAUAUAUUAUA - 97 |
| Stem-loop(if miRNA) |
-U UAA UC G AA AUGGGUGUCGGUUUU GAAAAAACCGGCA UGUAAUAUAUUAUAGGU UCGGUU U ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| U UAUCCACAGCCAAAA UUUUUUUGGCCGU AUAUUAUAUAAUAUCCA AGCCAA A UC --- GA G AA |
| Stem-loop sequence | UAUGGGUGUCGGUUUUUAAGAAAAAACCGGCAUCUGUAAUAUAUUAUAGGUGUCGGUUAAUUAAAAACCGAGACCUAUAAUAUAUUAUAAGUGCCGGUUUUUUUAAAACCGACACCUAUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JB164932.1 |
|
0.0 | Sequence 2596 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| LQ236601.1 |
|
0.0 | Sequence 2596 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| HI404471.1 |
|
0.0 | Sequence 2596 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| AK070414.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:J023053H09, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:18323537
"Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa"; Morin RD, Aksay G, Dolgosheina E, Ebhardt HA, Magrini V, Mardis ER, Sahinalp SC, Unrau PJ; Genome Res. 18:571-584(2008). |