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BaseInfo

ncRNA ID	osa-miR166a-5p
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:19987135-19987279 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	22 - GGAAUGUUGUCUGGUUCAAGG - 42
Stem-loop(if miRNA)	U         UGCU      U      UU         A          ----C   UUGCGGUUUUGAGGAUGA  GAAGCUAUU    UCUGAG GGAAUG  GUCUGGUUC AGGUCUCAUG     ACC                  U  |||||||||    |||||| ||||||  ||||||||| ||||||||||     |||                  U  CUUCGAUAG    AGACUC CCUUAC  CGGACCAGG UCUAGGGUGC     CUC                  U A         ----      C      UU         C          CUACU   CUUACUUUUUGGAACGUG
Stem-loop sequence	UGAAGCUAUUUGCUUCUGAGUGGAAUGUUGUCUGGUUCAAGGUCUCAUGCACCUUGCGGUUUUGAGGAUGAUUUGUGCAAGGUUUUUCAUUCCUCUCAUCCGUGGGAUCUCGGACCAGGCUUCAUUCCCCUCAGAGAUAGCUUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK071080.1	ncRNA:21   GGAACUUGGUCUGUUGUAAGG   1   *|*||||*||||||||||||* targets:1918   GCAUGAAGCAGACAACAUUCA   1938 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023078K06, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:12101121 "MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002).
2	PMID:21901091 "Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011).