| ncRNA ID | osa-miR7694-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr10:18864335-18864501 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 118 - AACCUAGUACUGGAUUAGUCACCA - 141 |
| Stem-loop(if miRNA) |
U UG C A C U C ---AGG GU UACUCCCUU UCC AAAAUAUAGCA CCUAGUA UGGAUUAG CACCACCUAGUAUUAUGAAU UGGACAGAG G U ||||||||| ||| ||||||||||| ||||||| |||||||| |||||||||||||||||||| ||||||||| | AUGAGGGAG AGG UUUUAUAUCGU GGAUCAU ACCUAAUC GUGGUGGAUCGUGAUGCUUA ACCUGUCUC C G G GU U C A U U GGGAGA AG |
| Stem-loop sequence | UUACUCCCUUUGUCCCAAAAUAUAGCAACCUAGUACUGGAUUAGUCACCACCUAGUAUUAUGAAUCUGGACAGAGAGGGGUUGGACAGAGGGCUCUGUCCAUAUUCGUAGUGCUAGGUGGUGUCUAAUCCAAUACUAGGCUGCUAUAUUUUUGGAUGGAGGGAGUAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015781706.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270831 (LOC9270831), transcript variant X2, mRNA | uncharacterized LOC9270831(LOC9270831) | coding protein | psRNATarget | |||||||||
| XM_015781707.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270831 (LOC9270831), transcript variant X3, mRNA | uncharacterized LOC9270831(LOC9270831) | coding protein | psRNATarget | |||||||||
| XM_015781705.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270831 (LOC9270831), transcript variant X1, mRNA | uncharacterized LOC9270831(LOC9270831) | coding protein | psRNATarget | |||||||||
| XM_015781708.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270831 (LOC9270831), transcript variant X4, mRNA | uncharacterized LOC9270831(LOC9270831) | coding protein | psRNATarget |
| 1 | PMID:23627500
"Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance"; Campo S, Peris-Peris C, Sire C, Moreno AB, Donaire L, Zytnicki M, Notredame C, Llave C, San Segundo B; New Phytol. 199:212-227(2013). |