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BaseInfo

ncRNA ID	osa-miR812q
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:18223398-18223639 [+]
Reference genome	MSU7
Source	miRBase
Length	24
Mature sequence(if miRNA)	192 - ACGUUGGGUACGAAUAUCUACGGC - 215
Stem-loop(if miRNA)	-  A                      UU  CAC     A        A     AC                     UUUAUGAUUAGUAUUUUUAU     --  AG  GUUAAAACAUAAAUAGUACU UACU CC UCCGUCUCAAAAUAAGUGCAGU  UG   UAUUC UACUUAAC UUUGA  GUUCGUCUUAUUUGAAAAUUU                    UGCUA  UU  AU                    U |||| || ||||||||||||||||||||||  ||   ||||| |||||||| |||||  |||||||||||||||||||||                    |||||  ||  ||                    U AUGA GG AGGCAGGGUUUUAUUCACGUCG  AU   AUAAG AUGGGUUG AAACU  CAGGCAGAAUAAACUUUUAAA                    ACACU  UU  UA                    A     U  -                      GC  -CU     C        C     GA                     --------------------     UU  --  ACUUUUAUAAAUCAGUGUGU
Stem-loop sequence	UACUCCAUCCGUCUCAAAAUAAGUGCAGUUUUGCACUAUUCAUACUUAACAUUUGAACGUUCGUCUUAUUUGAAAAUUUUUUAUGAUUAGUAUUUUUAUUGCUAUUAGAUGUUAAAACAUAAAUAGUACUUUAUGUGUGACUAAAUAUUUUCAAUUUUUUCACAAAAUUUUCAAAUAAGACGGACAGUCAAACGUUGGGUACGAAUAUCUACGGCUGCACUUAUUUUGGGACGGAGGUAGUA

Reference

1	PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011).