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BaseInfo

ncRNA ID	osa-miR2098-5p
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:18080242-18080313 [-]
Reference genome	MSU7
Source	miRBase
Length	20
Mature sequence(if miRNA)	39 - UCCCGUGGAGGCAGCCGAUG - 58
Stem-loop(if miRNA)	-CAGUCUU    C     C  GGA     -   A            GUGC AUUCC GU   GGCAG CCG UGAG         |||| ||||| ||   ||||| ||| |||G         CACG UGAGG CG   CUGUU GGC AUUA GUAAUCUU    -     -  -AA     U   A
Stem-loop sequence	CAGUCUUGUGCCAUUCCCGUGGAGGCAGCCGAUGAGGAUUAACGGUUUGUCAAGCGGAGUGCACUUCUAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT130388.1	ncRNA:20   GUAGCCGACGGAGGUGCCCU   1   ||||||||||||||||||*| targets:149   CAUCGGCUGCCUCCACGGAA   168 Target Full Sequence	1.5	Oryza sativa clone RRlibC00787 mRNA sequence	NA	coding protein	psRNATarget
XM_015767280.1	ncRNA:20   GUAGCCGACGGAGGUGCCCU   1   ||||||||||||||*||||* targets:741   CAUCGGCUGCCUCCUCGGGC   760 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chloride channel protein CLC-f (LOC4330553), transcript variant X1, mRNA	chloride channel protein CLC-f(LOC4330553)	coding protein	psRNATarget
AK101764.1	ncRNA:20   GUAGCCGACGGAGGUGCCCU   1   ||||||||||||||*||||* targets:443   CAUCGGCUGCCUCCUCGGGC   462 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033064D18, full insert sequence	NA	coding protein	psRNATarget
XM_015767281.1	ncRNA:20   GUAGCCGACGGAGGUGCCCU   1   ||||||||||||||*||||* targets:80   CAUCGGCUGCCUCCUCGGGC   99 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chloride channel protein CLC-f (LOC4330553), transcript variant X3, mRNA	chloride channel protein CLC-f(LOC4330553)	coding protein	psRNATarget
XM_015763824.1	ncRNA:20   GUAGCCGACGGAGGUGCCCU   1   |||||*||*||||||||||| targets:504   CAUCGCCUUCCUCCACGGGA   523 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279696 (LOC107279696), mRNA	uncharacterized LOC107279696(LOC107279696)	coding protein	psRNATarget

Reference

1	PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009).