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BaseInfo

ncRNA ID osa-miR5504
Species Oryza sativa
Class miRNA
Genome position Chr10:17228165-17228262 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 13 - AGUGACGGGAGGACUGCAAGG - 33
Stem-loop(if miRNA) AUU      UUUU UU G   G  C  G          --U     G -  U
   GCUGAA    G  C UUG AG UU UUCUGUUAUU   UAUUU C AC G
   ||||||    |  | ||| || || ||||||||||   ||||| | ||
   CGACUU    C  G AAC UC AG AGGGCAGUGA   AUAAA G UG C
UUU      ---- UU G   G  -  G          CAC     G A  C
Stem-loop sequence AUUGCUGAAUUUUGUUCGUUGGAGCUUGUUCUGUUAUUUUAUUUGCACUGCCGUAGGAAAUACACAGUGACGGGAGGACUGCAAGGUUCUUCAGCUUU

Reference

1 PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa";
Wei LQ, Yan LF, Wang T;
Genome Biol. 12:R53(2011).