ncRNA ID | osa-miR5504 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:17228165-17228262 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 13 - AGUGACGGGAGGACUGCAAGG - 33 |
Stem-loop(if miRNA) |
AUU      UUUU UU G   G  C  G          --U     G -  U    GCUGAA    G  C UUG AG UU UUCUGUUAUU   UAUUU C AC G    ||||||    |  | ||| || || ||||||||||   ||||| | ||    CGACUU    C  G AAC UC AG AGGGCAGUGA   AUAAA G UG C UUU      ---- UU G   G  -  G          CAC     G A  C |
Stem-loop sequence | AUUGCUGAAUUUUGUUCGUUGGAGCUUGUUCUGUUAUUUUAUUUGCACUGCCGUAGGAAAUACACAGUGACGGGAGGACUGCAAGGUUCUUCAGCUUU |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |